Taking the Doctor’s advice

coxtestUnderstanding how crystals start to form is tricky. We can’t see how it happens as crystals start off microscopic, it is very sensitive to pretty much every aspect of the experimental set up, and the standard theory (called classical nucleation theory) has basically zero ability to predict anything. So we are a bit stuck. But we don’t have the toughest job around, arguably the most complex, and hardest to understand, thing around is the human body, so perhaps the toughest job belongs to medics and biomedical scientists studying diseases.

More

Chicken Little comes home to roost

Zoo chicken roostingTwo years ago I wrote a blog post expressing amusement at Altmetric’s top papers for 2013. Now that Altmetric is rating a paper of mine #5 of 13,240 outputs (from the journal publisher and as of time of writing), it is clearly time for me revisit my position on Altmetric. Surely, anything that ranks my collaborators and me that highly must be on to something? Altmetric is software that collects references in the news media, blogs and on twitter, to a research paper, and then both provides links to them, and ranks the paper.

More

The right tool for the job

I almost titled this post Daily Mail celebrates work of immigrants shocker but as they have written a pretty accurate article on work I am part of, that would be a bit ungrateful. Yesterday a paper came out in Physical Review Letters that I am really rather proud of, although I made only a small contribution to it. Most of the credit should go to Andrea Fortini, who discovered the effect the paper describes, and to Nacho Martin-Fabiani and Joe Keddie who did the experiments to show that it works in the real world too. Andrea found the effect in computer simulations. We also had help from collaborators in Lyon who made the particles Nacho used.

More

Reducing the risk of heart disease with the aid of Russian Roulette

It is almost always easier to borrow ideas and techniques from other fields than to reinvent them. A PhD student, another academic and I, are studying two competing processes. These are crystallisation into two different crystals, called alpha and gamma, of a small molecule called glycine. The formation of alpha and gamma appear to be mutually exclusive, one or the other forms, not both. Crystallisation is statistical, it is at least partly random, and they are irreversible, once a crystal forms it persists.

More

One hundred and twenty five billion reasons to care about crystallisation

Atorvastatin-3D-ballsLipitor is a cholesterol-lowering drug sold by the pharma multinational Pfizer. People who want to lower their cholesterol take it every day for years or decades. High cholesterol is a common problem, bacon and cakes are just too tasty, and so the market for drugs like lipitor is absolutely enormous. It has been estimated that over fifteen years, Pfizer made $125 billion from lipitor. That’s a lot of money. I don’t have the figures but presumably a billion plus of that was in the UK (i.e., paid for by the NHS). So if you are a taxpayer even if you haven’t taken it, you’ve paid for it. So I’ve paid for it, but I am also interested in lipitor as I study crystallisation, and like most drugs lipitor tablets contain the drug in crystalline form.

More

Iron & Steel

ttSteel is not pure iron, it contains a small fraction of carbon that transforms the soft pure iron into the much tougher steel. I guess I have known that for a long time. But I have not really thought about how the carbon is incorporated into the crystalline iron. Dissolving salt in liquid water is straightforward. The ions of sodium and chloride just diffuse around in the liquid surrounded by the diffusing molecules of water. This is a liquid solution, a solution of salt in liquid water. Steel is a solid solution, it is carbon dissolved in solid iron.

More

The economics of life, death and weekend working

The Health Secretary Jeremy Hunt has been going round saying* “At the moment, for example, if you have a stroke at the weekend you are 20% more likely to die. That cannot be right, and that is something every doctor wants to sort out as well.”. This is a rather alarming way of saying that 11.1% of those admitted on a weekday because they have had a stroke are dead within 30 days, whereas 12.9% of those admitted on a weekend die within 30 days. This is from work of Roberts and coworkers.

More

Tiny tiny origami

DNA Origami TriangularMy Christmas reading has included a PhD* thesis, I am external examiner for a student at Oxford, and the viva is mid-January. The thesis is on the computer simulations of a model of DNA. The simulations are of what is called DNA origami. Origami is of course folding up a sheet of paper in a precise way, to make a paper plane, paper flower, etc.

More

Interwoven networks of crystals

This is an animation of a rotating cubic box containing a few thousand molecules. It is from computer simulations by James Mithen, who postdoced with me. Most of the molecules are in one of two different crystals, the yellow ones are in a type of crystal called a face-centred cubic (fcc) crystal, while the green ones are in a different type of crystal called body-centred cubic (bcc). Both are crystals in the sense that the molecules are arranged in a regular lattice but the two lattices are different, for example, in the fcc crystal each molecule has 12 neighbours while in bcc each molecule has 8.

More